Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GdnfP48540 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GdnfP48540 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GdnfP48540 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GdnfP48540 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.7□□□□□ -0.22
GdnfP48540 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.7□□□□□ -0.22
GdnfP48540 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GdnfP48540 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
GdnfP48540 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.7□□□□□ -0.22
GdnfP48540 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GdnfP48540 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GdnfP48540 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.69□□□□□ -0.22
GdnfP48540 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GdnfP48540 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GdnfP48540 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GdnfP48540 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.69□□□□□ -0.22
GdnfP48540 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GdnfP48540 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.69□□□□□ -0.22
GdnfP48540 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
GdnfP48540 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.69□□□□□ -0.22
GdnfP48540 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GdnfP48540 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.68□□□□□ -0.22
GdnfP48540 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.68□□□□□ -0.22
GdnfP48540 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.68□□□□□ -0.22
GdnfP48540 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.68□□□□□ -0.22
GdnfP48540 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.68□□□□□ -0.22
GdnfP48540 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
GdnfP48540 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.68□□□□□ -0.22
GdnfP48540 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
GdnfP48540 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms