Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prox1P48437 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.03■□□□□ -0
Prox1P48437 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.03■□□□□ -0
Prox1P48437 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Prox1P48437 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Prox1P48437 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prox1P48437 Gm29707-201ENSMUST00000196325 491 ntBASIC15.03■□□□□ -0
Prox1P48437 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.03■□□□□ -0
Prox1P48437 Gm7213-201ENSMUST00000215977 950 ntBASIC15.03■□□□□ -0
Prox1P48437 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.03■□□□□ -0
Prox1P48437 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.03■□□□□ -0
Prox1P48437 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.03■□□□□ -0
Prox1P48437 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.03■□□□□ -0
Prox1P48437 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prox1P48437 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.02■□□□□ -0
Prox1P48437 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Prox1P48437 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.02■□□□□ -0
Prox1P48437 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.02■□□□□ -0
Prox1P48437 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prox1P48437 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prox1P48437 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prox1P48437 Gm9987-201ENSMUST00000069768 567 ntBASIC15.02■□□□□ -0
Prox1P48437 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.02□□□□□ -0.01
Prox1P48437 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.02□□□□□ -0.01
Prox1P48437 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prox1P48437 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prox1P48437 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
Prox1P48437 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Gm6433-201ENSMUST00000118634 875 ntBASIC15.01□□□□□ -0.01
Prox1P48437 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.01□□□□□ -0.01
Prox1P48437 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prox1P48437 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prox1P48437 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prox1P48437 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prox1P48437 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Gm16425-201ENSMUST00000118143 3130 ntBASIC15□□□□□ -0.01
Prox1P48437 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15□□□□□ -0.01
Prox1P48437 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prox1P48437 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Gm20472-201ENSMUST00000174403 1240 ntBASIC15□□□□□ -0.01
Prox1P48437 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15□□□□□ -0.01
Prox1P48437 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prox1P48437 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms