Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm8410-201ENSMUST00000117225 605 ntBASIC18.69■□□□□ 0.58
Nedd4P46935 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.69■□□□□ 0.58
Nedd4P46935 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm9824-201ENSMUST00000178707 561 ntBASIC18.69■□□□□ 0.58
Nedd4P46935 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm25857-201ENSMUST00000082788 129 ntBASIC18.69■□□□□ 0.58
Nedd4P46935 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nedd4P46935 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.69■□□□□ 0.58
Nedd4P46935 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.69■□□□□ 0.58
Nedd4P46935 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.68■□□□□ 0.58
Nedd4P46935 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.68■□□□□ 0.58
Nedd4P46935 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.68■□□□□ 0.58
Nedd4P46935 Gm14719-201ENSMUST00000121891 340 ntBASIC18.68■□□□□ 0.58
Nedd4P46935 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nedd4P46935 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd4P46935 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nedd4P46935 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Gm2810-201ENSMUST00000118681 990 ntBASIC18.67■□□□□ 0.58
Nedd4P46935 Gm15487-201ENSMUST00000122373 465 ntBASIC18.67■□□□□ 0.58
Nedd4P46935 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nedd4P46935 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.67■□□□□ 0.58
Nedd4P46935 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.67■□□□□ 0.58
Nedd4P46935 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nedd4P46935 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd4P46935 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Nedd4P46935 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nedd4P46935 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.66■□□□□ 0.58
Nedd4P46935 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.66■□□□□ 0.58
Nedd4P46935 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.66■□□□□ 0.58
Nedd4P46935 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nedd4P46935 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nedd4P46935 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nedd4P46935 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd4P46935 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Nedd4P46935 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd4P46935 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd4P46935 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd4P46935 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd4P46935 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd4P46935 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms