Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.76□□□□□ -0.05
Cdx2P43241 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Gm8318-201ENSMUST00000182954 872 ntBASIC14.76□□□□□ -0.05
Cdx2P43241 Gm7774-201ENSMUST00000200064 533 ntBASIC14.76□□□□□ -0.05
Cdx2P43241 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdx2P43241 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdx2P43241 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdx2P43241 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.75□□□□□ -0.05
Cdx2P43241 Gm18057-201ENSMUST00000208220 503 ntBASIC14.75□□□□□ -0.05
Cdx2P43241 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdx2P43241 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdx2P43241 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdx2P43241 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdx2P43241 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdx2P43241 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdx2P43241 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Gm27430-201ENSMUST00000184585 107 ntBASIC14.74□□□□□ -0.05
Cdx2P43241 Gm44333-201ENSMUST00000197168 107 ntBASIC14.74□□□□□ -0.05
Cdx2P43241 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.74□□□□□ -0.05
Cdx2P43241 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdx2P43241 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Cdx2P43241 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.74□□□□□ -0.05
Cdx2P43241 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdx2P43241 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdx2P43241 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.74□□□□□ -0.05
Cdx2P43241 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdx2P43241 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdx2P43241 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdx2P43241 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cdx2P43241 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdx2P43241 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdx2P43241 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms