Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Irf8P23611 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Irf8P23611 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.8■□□□□ 0.28
Irf8P23611 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Irf8P23611 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Irf8P23611 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Irf8P23611 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Gm11764-201ENSMUST00000120221 623 ntBASIC16.8■□□□□ 0.28
Irf8P23611 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Irf8P23611 Asic1-205ENSMUST00000228185 1818 ntBASIC16.8■□□□□ 0.28
Irf8P23611 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.79■□□□□ 0.28
Irf8P23611 Gm6550-201ENSMUST00000187574 993 ntBASIC16.79■□□□□ 0.28
Irf8P23611 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.79■□□□□ 0.28
Irf8P23611 Gm18195-201ENSMUST00000207604 706 ntBASIC16.79■□□□□ 0.28
Irf8P23611 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.79■□□□□ 0.28
Irf8P23611 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Irf8P23611 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Irf8P23611 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Gm18489-201ENSMUST00000172565 551 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Gm8318-201ENSMUST00000182954 872 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Gm37153-201ENSMUST00000193637 231 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.78■□□□□ 0.28
Irf8P23611 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Irf8P23611 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Irf8P23611 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.78■□□□□ 0.28
Irf8P23611 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Irf8P23611 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Irf8P23611 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.77■□□□□ 0.28
Irf8P23611 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Irf8P23611 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Irf8P23611 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Gm15173-201ENSMUST00000122049 433 ntBASIC16.77■□□□□ 0.28
Irf8P23611 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Irf8P23611 Gm5682-201ENSMUST00000173402 505 ntBASIC16.77■□□□□ 0.28
Irf8P23611 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Irf8P23611 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.77■□□□□ 0.28
Irf8P23611 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Irf8P23611 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.77■□□□□ 0.28
Irf8P23611 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Irf8P23611 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.77■□□□□ 0.27
Irf8P23611 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Irf8P23611 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Irf8P23611 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Irf8P23611 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.77■□□□□ 0.27
Irf8P23611 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Irf8P23611 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Irf8P23611 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Irf8P23611 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Irf8P23611 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Irf8P23611 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms