Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm5682-201ENSMUST00000173402 505 ntBASIC17.02■□□□□ 0.32
Pde6bP23440 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Pde6bP23440 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.02■□□□□ 0.32
Pde6bP23440 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pde6bP23440 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Pde6bP23440 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.02■□□□□ 0.31
Pde6bP23440 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pde6bP23440 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.02■□□□□ 0.31
Pde6bP23440 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6bP23440 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Gm4995-201ENSMUST00000117247 432 ntBASIC17.01■□□□□ 0.31
Pde6bP23440 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.01■□□□□ 0.31
Pde6bP23440 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pde6bP23440 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.01■□□□□ 0.31
Pde6bP23440 Mir8117-201ENSMUST00000184773 107 ntBASIC17.01■□□□□ 0.31
Pde6bP23440 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Pde6bP23440 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6bP23440 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6bP23440 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17■□□□□ 0.31
Pde6bP23440 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Gm11873-201ENSMUST00000117877 1304 ntBASIC17■□□□□ 0.31
Pde6bP23440 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pde6bP23440 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17■□□□□ 0.31
Pde6bP23440 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pde6bP23440 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Mir3113-201ENSMUST00000175478 76 ntBASIC17■□□□□ 0.31
Pde6bP23440 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17■□□□□ 0.31
Pde6bP23440 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pde6bP23440 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pde6bP23440 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Pde6bP23440 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pde6bP23440 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pde6bP23440 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6bP23440 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pde6bP23440 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.99■□□□□ 0.31
Pde6bP23440 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.99■□□□□ 0.31
Pde6bP23440 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.99■□□□□ 0.31
Pde6bP23440 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms