Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Clk1P22518 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Clk1P22518 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Clk1P22518 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Clk1P22518 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.53□□□□□ -0.08
Clk1P22518 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.53□□□□□ -0.08
Clk1P22518 Gm15372-201ENSMUST00000120729 834 ntBASIC14.53□□□□□ -0.08
Clk1P22518 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.53□□□□□ -0.08
Clk1P22518 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Clk1P22518 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.53□□□□□ -0.08
Clk1P22518 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.53□□□□□ -0.08
Clk1P22518 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.53□□□□□ -0.08
Clk1P22518 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk1P22518 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Clk1P22518 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Clk1P22518 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Clk1P22518 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Clk1P22518 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk1P22518 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk1P22518 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk1P22518 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.52□□□□□ -0.08
Clk1P22518 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.52□□□□□ -0.09
Clk1P22518 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Clk1P22518 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.52□□□□□ -0.09
Clk1P22518 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Clk1P22518 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.52□□□□□ -0.09
Clk1P22518 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.52□□□□□ -0.09
Clk1P22518 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.52□□□□□ -0.09
Clk1P22518 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk1P22518 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.51□□□□□ -0.09
Clk1P22518 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.51□□□□□ -0.09
Clk1P22518 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clk1P22518 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Clk1P22518 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clk1P22518 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Clk1P22518 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.51□□□□□ -0.09
Clk1P22518 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Gm44454-201ENSMUST00000198541 138 ntBASIC14.51□□□□□ -0.09
Clk1P22518 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk1P22518 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms