Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cntn1P12960 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Cntn1P12960 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cntn1P12960 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.95□□□□□ -0.02
Cntn1P12960 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.95□□□□□ -0.02
Cntn1P12960 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.95□□□□□ -0.02
Cntn1P12960 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cntn1P12960 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.94□□□□□ -0.02
Cntn1P12960 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Gm19164-201ENSMUST00000210667 640 ntBASIC14.94□□□□□ -0.02
Cntn1P12960 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.94□□□□□ -0.02
Cntn1P12960 Psmb5-202ENSMUST00000227257 622 ntBASIC14.94□□□□□ -0.02
Cntn1P12960 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cntn1P12960 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cntn1P12960 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.94□□□□□ -0.02
Cntn1P12960 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.94□□□□□ -0.02
Cntn1P12960 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cntn1P12960 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cntn1P12960 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cntn1P12960 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.93□□□□□ -0.02
Cntn1P12960 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Gm15358-201ENSMUST00000119249 520 ntBASIC14.93□□□□□ -0.02
Cntn1P12960 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.93□□□□□ -0.02
Cntn1P12960 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.93□□□□□ -0.02
Cntn1P12960 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.93□□□□□ -0.02
Cntn1P12960 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cntn1P12960 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.92□□□□□ -0.02
Cntn1P12960 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.92□□□□□ -0.02
Cntn1P12960 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Cntn1P12960 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.92□□□□□ -0.02
Cntn1P12960 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.92□□□□□ -0.02
Cntn1P12960 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cntn1P12960 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.92□□□□□ -0.02
Cntn1P12960 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cntn1P12960 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms