Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.78□□□□□ -0.04
ApoeP08226 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ApoeP08226 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ApoeP08226 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.77□□□□□ -0.04
ApoeP08226 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.77□□□□□ -0.04
ApoeP08226 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ApoeP08226 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.77□□□□□ -0.05
ApoeP08226 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Gm10052-201ENSMUST00000168019 960 ntBASIC14.77□□□□□ -0.05
ApoeP08226 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.77□□□□□ -0.05
ApoeP08226 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.77□□□□□ -0.05
ApoeP08226 Gm7729-201ENSMUST00000050143 801 ntBASIC14.77□□□□□ -0.05
ApoeP08226 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.77□□□□□ -0.05
ApoeP08226 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.77□□□□□ -0.05
ApoeP08226 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ApoeP08226 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ApoeP08226 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ApoeP08226 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.76□□□□□ -0.05
ApoeP08226 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ApoeP08226 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.76□□□□□ -0.05
ApoeP08226 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ApoeP08226 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ApoeP08226 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
ApoeP08226 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
ApoeP08226 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.75□□□□□ -0.05
ApoeP08226 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ApoeP08226 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ApoeP08226 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms