Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06344 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06344 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06344 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06344 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
P06344 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
P06344 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
P06344 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
P06344 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.89□□□□□ -0.19
P06344 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.89□□□□□ -0.19
P06344 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
P06344 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.89□□□□□ -0.19
P06344 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.89□□□□□ -0.19
P06344 Gm8344-201ENSMUST00000119813 856 ntBASIC13.89□□□□□ -0.19
P06344 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
P06344 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
P06344 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
P06344 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.89□□□□□ -0.19
P06344 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.89□□□□□ -0.19
P06344 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P06344 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
P06344 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06344 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.88□□□□□ -0.19
P06344 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.88□□□□□ -0.19
P06344 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.88□□□□□ -0.19
P06344 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
P06344 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
P06344 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
P06344 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
P06344 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
P06344 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06344 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P06344 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P06344 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.87□□□□□ -0.19
P06344 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.87□□□□□ -0.19
P06344 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.87□□□□□ -0.19
P06344 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Gm6443-201ENSMUST00000203599 874 ntBASIC13.87□□□□□ -0.19
P06344 AW822252-206ENSMUST00000208904 237 ntBASIC13.87□□□□□ -0.19
P06344 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.87□□□□□ -0.19
P06344 AV026068-213ENSMUST00000223675 1171 ntBASIC13.87□□□□□ -0.19
P06344 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.87□□□□□ -0.19
P06344 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P06344 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06344 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms