Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.53□□□□□ -0.08
Tuba1bP05213 AA414768-201ENSMUST00000121924 1257 ntBASIC14.53□□□□□ -0.08
Tuba1bP05213 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.53□□□□□ -0.08
Tuba1bP05213 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.53□□□□□ -0.08
Tuba1bP05213 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.53□□□□□ -0.08
Tuba1bP05213 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tuba1bP05213 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.53□□□□□ -0.08
Tuba1bP05213 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Tuba1bP05213 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tuba1bP05213 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tuba1bP05213 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Gm13186-201ENSMUST00000118031 316 ntBASIC14.52□□□□□ -0.09
Tuba1bP05213 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tuba1bP05213 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tuba1bP05213 BC037039-201ENSMUST00000192003 2205 ntBASIC14.51□□□□□ -0.09
Tuba1bP05213 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.51□□□□□ -0.09
Tuba1bP05213 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Tuba1bP05213 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tuba1bP05213 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.51□□□□□ -0.09
Tuba1bP05213 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tuba1bP05213 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tuba1bP05213 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.51□□□□□ -0.09
Tuba1bP05213 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tuba1bP05213 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tuba1bP05213 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Tuba1bP05213 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.5□□□□□ -0.09
Tuba1bP05213 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
Tuba1bP05213 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tuba1bP05213 Gm11355-201ENSMUST00000121120 306 ntBASIC14.5□□□□□ -0.09
Tuba1bP05213 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.5□□□□□ -0.09
Tuba1bP05213 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms