Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.72□□□□□ -0.21
P04224 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.72□□□□□ -0.21
P04224 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P04224 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.72□□□□□ -0.21
P04224 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.72□□□□□ -0.21
P04224 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P04224 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P04224 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.72□□□□□ -0.21
P04224 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.72□□□□□ -0.21
P04224 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04224 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
P04224 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
P04224 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.71□□□□□ -0.21
P04224 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.71□□□□□ -0.21
P04224 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.71□□□□□ -0.21
P04224 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
P04224 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.71□□□□□ -0.21
P04224 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
P04224 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04224 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
P04224 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P04224 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P04224 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04224 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.7□□□□□ -0.22
P04224 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.7□□□□□ -0.22
P04224 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.7□□□□□ -0.22
P04224 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.7□□□□□ -0.22
P04224 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.7□□□□□ -0.22
P04224 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.7□□□□□ -0.22
P04224 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.7□□□□□ -0.22
P04224 Gm10653-202ENSMUST00000139570 835 ntBASIC13.7□□□□□ -0.22
P04224 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
P04224 Gm20760-201ENSMUST00000179197 648 ntBASIC13.7□□□□□ -0.22
P04224 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.7□□□□□ -0.22
P04224 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.7□□□□□ -0.22
P04224 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
P04224 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04224 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.7□□□□□ -0.22
P04224 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04224 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.69□□□□□ -0.22
P04224 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P04224 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.69□□□□□ -0.22
P04224 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P04224 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P04224 Gm13168-201ENSMUST00000121771 632 ntBASIC13.69□□□□□ -0.22
P04224 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
P04224 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.69□□□□□ -0.22
P04224 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms