Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.41□□□□□ -0.26
H3f3cP02301 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Gm12644-201ENSMUST00000119935 606 ntBASIC13.4□□□□□ -0.26
H3f3cP02301 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Gm34391-201ENSMUST00000203706 907 ntBASIC13.4□□□□□ -0.26
H3f3cP02301 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.4□□□□□ -0.26
H3f3cP02301 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.4□□□□□ -0.26
H3f3cP02301 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3f3cP02301 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
H3f3cP02301 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
H3f3cP02301 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.39□□□□□ -0.27
H3f3cP02301 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Gm12497-201ENSMUST00000138778 237 ntBASIC13.39□□□□□ -0.27
H3f3cP02301 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.39□□□□□ -0.27
H3f3cP02301 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.39□□□□□ -0.27
H3f3cP02301 Gm6257-201ENSMUST00000163864 910 ntBASIC13.39□□□□□ -0.27
H3f3cP02301 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.39□□□□□ -0.27
H3f3cP02301 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
H3f3cP02301 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.39□□□□□ -0.27
H3f3cP02301 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
H3f3cP02301 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H3f3cP02301 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H3f3cP02301 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3f3cP02301 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.38□□□□□ -0.27
H3f3cP02301 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
H3f3cP02301 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
H3f3cP02301 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.38□□□□□ -0.27
H3f3cP02301 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H3f3cP02301 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.38□□□□□ -0.27
H3f3cP02301 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3f3cP02301 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
H3f3cP02301 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3f3cP02301 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms