Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Gm4995-201ENSMUST00000117247 432 ntBASIC15.73■□□□□ 0.11
Sp1O89090 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.73■□□□□ 0.11
Sp1O89090 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.73■□□□□ 0.11
Sp1O89090 Gm37935-201ENSMUST00000192012 982 ntBASIC15.73■□□□□ 0.11
Sp1O89090 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.73■□□□□ 0.11
Sp1O89090 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.73■□□□□ 0.11
Sp1O89090 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sp1O89090 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sp1O89090 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.73■□□□□ 0.11
Sp1O89090 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sp1O89090 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.72■□□□□ 0.11
Sp1O89090 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Sp1O89090 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.72■□□□□ 0.11
Sp1O89090 Gm13597-201ENSMUST00000121239 375 ntBASIC15.72■□□□□ 0.11
Sp1O89090 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sp1O89090 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.72■□□□□ 0.11
Sp1O89090 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.72■□□□□ 0.11
Sp1O89090 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.72■□□□□ 0.11
Sp1O89090 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sp1O89090 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.71■□□□□ 0.11
Sp1O89090 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.71■□□□□ 0.11
Sp1O89090 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sp1O89090 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.71■□□□□ 0.11
Sp1O89090 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.71■□□□□ 0.11
Sp1O89090 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Sp1O89090 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.71■□□□□ 0.11
Sp1O89090 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sp1O89090 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sp1O89090 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sp1O89090 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sp1O89090 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sp1O89090 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.7■□□□□ 0.1
Sp1O89090 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.7■□□□□ 0.1
Sp1O89090 Mir3113-201ENSMUST00000175478 76 ntBASIC15.7■□□□□ 0.1
Sp1O89090 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.7■□□□□ 0.1
Sp1O89090 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.7■□□□□ 0.1
Sp1O89090 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Gm10175-201ENSMUST00000086013 645 ntBASIC15.7■□□□□ 0.1
Sp1O89090 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sp1O89090 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Sp1O89090 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms