Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Best1O88870 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Best1O88870 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Best1O88870 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.96□□□□□ -0.01
Best1O88870 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.96□□□□□ -0.01
Best1O88870 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.96□□□□□ -0.01
Best1O88870 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.96□□□□□ -0.01
Best1O88870 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.96□□□□□ -0.01
Best1O88870 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Gm10175-201ENSMUST00000086013 645 ntBASIC14.96□□□□□ -0.01
Best1O88870 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Best1O88870 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Best1O88870 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Best1O88870 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Best1O88870 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Best1O88870 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.95□□□□□ -0.02
Best1O88870 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.95□□□□□ -0.02
Best1O88870 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.95□□□□□ -0.02
Best1O88870 Gm11594-201ENSMUST00000122313 162 ntBASIC14.95□□□□□ -0.02
Best1O88870 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Best1O88870 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.95□□□□□ -0.02
Best1O88870 Gm2756-201ENSMUST00000195851 400 ntBASIC14.95□□□□□ -0.02
Best1O88870 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Best1O88870 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.95□□□□□ -0.02
Best1O88870 Gm18246-201ENSMUST00000221023 728 ntBASIC14.95□□□□□ -0.02
Best1O88870 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.95□□□□□ -0.02
Best1O88870 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Best1O88870 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Best1O88870 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Best1O88870 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.94□□□□□ -0.02
Best1O88870 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Best1O88870 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Best1O88870 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.94□□□□□ -0.02
Best1O88870 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.94□□□□□ -0.02
Best1O88870 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.94□□□□□ -0.02
Best1O88870 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Best1O88870 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Best1O88870 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.94□□□□□ -0.02
Best1O88870 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms