Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smarce1O54941 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.56■□□□□ 0.56
Smarce1O54941 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smarce1O54941 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarce1O54941 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.55■□□□□ 0.56
Smarce1O54941 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smarce1O54941 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarce1O54941 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Smarce1O54941 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Smarce1O54941 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.54■□□□□ 0.56
Smarce1O54941 Gm25406-201ENSMUST00000157599 105 ntBASIC18.54■□□□□ 0.56
Smarce1O54941 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.54■□□□□ 0.56
Smarce1O54941 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Smarce1O54941 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.54■□□□□ 0.56
Smarce1O54941 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.54■□□□□ 0.56
Smarce1O54941 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarce1O54941 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Smarce1O54941 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Smarce1O54941 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smarce1O54941 Gm13312-201ENSMUST00000119631 718 ntBASIC18.53■□□□□ 0.56
Smarce1O54941 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.53■□□□□ 0.56
Smarce1O54941 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Smarce1O54941 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.53■□□□□ 0.56
Smarce1O54941 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Smarce1O54941 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarce1O54941 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.53■□□□□ 0.56
Smarce1O54941 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Smarce1O54941 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smarce1O54941 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Smarce1O54941 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.52■□□□□ 0.56
Smarce1O54941 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Smarce1O54941 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.52■□□□□ 0.56
Smarce1O54941 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.52■□□□□ 0.56
Smarce1O54941 Gm7367-201ENSMUST00000057611 492 ntBASIC18.52■□□□□ 0.56
Smarce1O54941 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarce1O54941 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms