Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Nr1i3O35627 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nr1i3O35627 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1i3O35627 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.74■□□□□ 0.27
Nr1i3O35627 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Nr1i3O35627 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.74■□□□□ 0.27
Nr1i3O35627 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nr1i3O35627 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1i3O35627 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nr1i3O35627 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.73■□□□□ 0.27
Nr1i3O35627 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 Gm15165-201ENSMUST00000118140 502 ntBASIC16.73■□□□□ 0.27
Nr1i3O35627 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.73■□□□□ 0.27
Nr1i3O35627 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Nr1i3O35627 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.73■□□□□ 0.27
Nr1i3O35627 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1i3O35627 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.73■□□□□ 0.27
Nr1i3O35627 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms