Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm6257-201ENSMUST00000163864 910 ntBASIC15.23■□□□□ 0.03
Npc1O35604 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Npc1O35604 Gm7230-201ENSMUST00000173026 815 ntBASIC15.23■□□□□ 0.03
Npc1O35604 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.23■□□□□ 0.03
Npc1O35604 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.23■□□□□ 0.03
Npc1O35604 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.23■□□□□ 0.03
Npc1O35604 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Npc1O35604 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Npc1O35604 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Npc1O35604 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.22■□□□□ 0.03
Npc1O35604 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.22■□□□□ 0.03
Npc1O35604 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npc1O35604 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Npc1O35604 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.21■□□□□ 0.03
Npc1O35604 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
Npc1O35604 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.21■□□□□ 0.03
Npc1O35604 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Npc1O35604 Gm13418-201ENSMUST00000119097 944 ntBASIC15.21■□□□□ 0.03
Npc1O35604 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Npc1O35604 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.21■□□□□ 0.03
Npc1O35604 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Npc1O35604 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.21■□□□□ 0.03
Npc1O35604 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Npc1O35604 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npc1O35604 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npc1O35604 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npc1O35604 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npc1O35604 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npc1O35604 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Npc1O35604 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.2■□□□□ 0.02
Npc1O35604 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.2■□□□□ 0.02
Npc1O35604 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.2■□□□□ 0.02
Npc1O35604 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.2■□□□□ 0.02
Npc1O35604 Gm18622-201ENSMUST00000219361 595 ntBASIC15.2■□□□□ 0.02
Npc1O35604 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms