Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Mir1199-201ENSMUST00000117015 119 ntBASIC12.2□□□□□ -0.46
Tnfsf11O35235 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.2□□□□□ -0.46
Tnfsf11O35235 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gm10653-202ENSMUST00000139570 835 ntBASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.19□□□□□ -0.46
Tnfsf11O35235 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf11O35235 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.18□□□□□ -0.46
Tnfsf11O35235 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.18□□□□□ -0.46
Tnfsf11O35235 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.18□□□□□ -0.46
Tnfsf11O35235 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.18□□□□□ -0.46
Tnfsf11O35235 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.18□□□□□ -0.46
Tnfsf11O35235 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf11O35235 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms