Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.19■□□□□ 0.18
Ebf3O08791 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.19■□□□□ 0.18
Ebf3O08791 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Ebf3O08791 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.18■□□□□ 0.18
Ebf3O08791 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.18■□□□□ 0.18
Ebf3O08791 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.18■□□□□ 0.18
Ebf3O08791 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ebf3O08791 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ebf3O08791 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebf3O08791 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ebf3O08791 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ebf3O08791 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.17■□□□□ 0.18
Ebf3O08791 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.17■□□□□ 0.18
Ebf3O08791 Gm25911-201ENSMUST00000157621 56 ntBASIC16.17■□□□□ 0.18
Ebf3O08791 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.17■□□□□ 0.18
Ebf3O08791 Gm5682-201ENSMUST00000173402 505 ntBASIC16.17■□□□□ 0.18
Ebf3O08791 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.17■□□□□ 0.18
Ebf3O08791 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.17■□□□□ 0.18
Ebf3O08791 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ebf3O08791 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebf3O08791 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ebf3O08791 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.16■□□□□ 0.18
Ebf3O08791 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.16■□□□□ 0.18
Ebf3O08791 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Ebf3O08791 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.16■□□□□ 0.18
Ebf3O08791 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Gm10175-201ENSMUST00000086013 645 ntBASIC16.16■□□□□ 0.18
Ebf3O08791 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ebf3O08791 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms