Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh11xF6ZNL5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Gm8097-201ENSMUST00000117903 829 ntBASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh11xF6ZNL5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Gm18195-201ENSMUST00000207604 706 ntBASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Pcdh11xF6ZNL5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Gm8655-201ENSMUST00000221159 852 ntBASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh11xF6ZNL5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh11xF6ZNL5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh11xF6ZNL5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms