Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Gm18622-201ENSMUST00000219361 595 ntBASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Mir1895-201ENSMUST00000122615 79 ntBASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gm4899-201ENSMUST00000178708 719 ntBASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Gm27494-201ENSMUST00000184735 189 ntBASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
R3hdm1E9Q9Q2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
R3hdm1E9Q9Q2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
R3hdm1E9Q9Q2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
R3hdm1E9Q9Q2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm1E9Q9Q2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Gm5745-201ENSMUST00000183748 313 ntBASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm1E9Q9Q2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms