Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 AC124732.1-201ENSMUST00000221551 910 ntBASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Gm12490-201ENSMUST00000120255 560 ntBASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc141E9Q8Q6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc141E9Q8Q6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC23.2■■□□□ 1.31
Ccdc141E9Q8Q6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ccdc141E9Q8Q6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
Ccdc141E9Q8Q6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc141E9Q8Q6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Gm15321-201ENSMUST00000121290 288 ntBASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Gm9794-201ENSMUST00000202370 423 ntBASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc141E9Q8Q6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Gm7556-201ENSMUST00000201178 1084 ntBASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc141E9Q8Q6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Gm27838-201ENSMUST00000184829 128 ntBASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc141E9Q8Q6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC23.16■■□□□ 1.3
Ccdc141E9Q8Q6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms