Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Gm8318-201ENSMUST00000182954 872 ntBASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Gm44974-201ENSMUST00000206387 1279 ntBASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Gm28760-201ENSMUST00000185995 736 ntBASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Gm8096-201ENSMUST00000209921 1591 ntBASIC24.3■■□□□ 1.48
Shroom2A2ALU4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Fam105a-203ENSMUST00000226170 3043 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Gm7286-201ENSMUST00000182691 1007 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Mir6392-201ENSMUST00000184924 108 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Gm45784-201ENSMUST00000188360 142 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 AC154687.2-201ENSMUST00000223853 640 ntBASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC24.29■■□□□ 1.48
Shroom2A2ALU4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Gm38241-201ENSMUST00000192641 898 ntBASIC24.28■■□□□ 1.48
Shroom2A2ALU4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom2A2ALU4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC24.27■■□□□ 1.48
Shroom2A2ALU4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm14660-201ENSMUST00000119809 575 ntBASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm9728-201ENSMUST00000200197 1055 ntBASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm19220-201ENSMUST00000222682 803 ntBASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Shroom2A2ALU4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms