Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm13312-201ENSMUST00000119631 718 ntBASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm25406-201ENSMUST00000157599 105 ntBASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv19A0A0B4J1H4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Mir7071-201ENSMUST00000184847 69 ntBASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv19A0A0B4J1H4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv19A0A0B4J1H4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms