Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Gm12644-201ENSMUST00000119935 606 ntBASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Gm8655-201ENSMUST00000221159 852 ntBASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm8344-201ENSMUST00000119813 856 ntBASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Ank2-226ENSMUST00000189368 339 ntBASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv4A0A075B5I2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv4A0A075B5I2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv4A0A075B5I2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms