Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gm7367-201ENSMUST00000057611 492 ntBASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
H2afb2S4R1M3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb2S4R1M3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm18669-201ENSMUST00000216049 778 ntBASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb2S4R1M3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb2S4R1M3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
H2afb2S4R1M3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms