Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb3S4R1G7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Mir6404-201ENSMUST00000183699 94 ntBASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Gm5587-201ENSMUST00000206270 674 ntBASIC14.08□□□□□ -0.16
H2afb3S4R1G7 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.08□□□□□ -0.16
H2afb3S4R1G7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Asic1-205ENSMUST00000228185 1818 ntBASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb3S4R1G7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.07□□□□□ -0.16
H2afb3S4R1G7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Gm6257-201ENSMUST00000163864 910 ntBASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms