Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Phf1Q9Z1B8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Phf1Q9Z1B8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 App-207ENSMUST00000227737 2827 ntBASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phf1Q9Z1B8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm25406-201ENSMUST00000157599 105 ntBASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phf1Q9Z1B8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Phf1Q9Z1B8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phf1Q9Z1B8 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.35□□□□□ -0.11
Phf1Q9Z1B8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Phf1Q9Z1B8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Phf1Q9Z1B8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms