Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn9Q9Z0S7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn9Q9Z0S7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Gm15372-201ENSMUST00000120729 834 ntBASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Gm25745-201ENSMUST00000174945 133 ntBASIC15.03■□□□□ -0
Cldn9Q9Z0S7 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.03■□□□□ -0
Cldn9Q9Z0S7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.03■□□□□ -0
Cldn9Q9Z0S7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn9Q9Z0S7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cldn9Q9Z0S7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn9Q9Z0S7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn9Q9Z0S7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn9Q9Z0S7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn9Q9Z0S7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms