Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Gm25406-201ENSMUST00000157599 105 ntBASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Gm10819-201ENSMUST00000099988 561 ntBASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40aQ9R1C7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Prpf40aQ9R1C7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf40aQ9R1C7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 App-207ENSMUST00000227737 2827 ntBASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40aQ9R1C7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40aQ9R1C7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gm37444-201ENSMUST00000193605 439 ntBASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40aQ9R1C7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40aQ9R1C7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms