Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpf2Q9JJ80 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gm18032-201ENSMUST00000222541 538 ntBASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpf2Q9JJ80 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpf2Q9JJ80 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rpf2Q9JJ80 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpf2Q9JJ80 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.58■□□□□ 0.24
Rpf2Q9JJ80 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms