Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube3bQ9ES34 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube3bQ9ES34 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.54■□□□□ 0.56
Ube3bQ9ES34 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.54■□□□□ 0.56
Ube3bQ9ES34 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Gm42790-201ENSMUST00000201268 969 ntBASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube3bQ9ES34 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube3bQ9ES34 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Ube3bQ9ES34 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Gm14494-201ENSMUST00000118786 435 ntBASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube3bQ9ES34 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms