Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a3bpQ9EQG9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Gm24589-201ENSMUST00000116692 94 ntBASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a3bpQ9EQG9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Gm34391-201ENSMUST00000203706 907 ntBASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Col4a3bpQ9EQG9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Rprl3-201ENSMUST00000157400 290 ntBASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a3bpQ9EQG9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Gm15372-201ENSMUST00000120729 834 ntBASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col4a3bpQ9EQG9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms