Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Gm14722-201ENSMUST00000118943 689 ntBASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Gm4459-201ENSMUST00000118750 468 ntBASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4bQ9D8B3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Gm7367-201ENSMUST00000057611 492 ntBASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4bQ9D8B3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
Chmp4bQ9D8B3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4bQ9D8B3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4bQ9D8B3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4bQ9D8B3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4bQ9D8B3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Gm18622-201ENSMUST00000219361 595 ntBASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4bQ9D8B3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms