Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm11539-201ENSMUST00000119837 557 ntBASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Gm20760-201ENSMUST00000179197 648 ntBASIC15.67■□□□□ 0.1
Trim42Q9D2H5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim42Q9D2H5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Gm10653-202ENSMUST00000139570 835 ntBASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Gm29707-201ENSMUST00000196325 491 ntBASIC15.65■□□□□ 0.1
Trim42Q9D2H5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim42Q9D2H5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trim42Q9D2H5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim42Q9D2H5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.64■□□□□ 0.09
Trim42Q9D2H5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim42Q9D2H5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim42Q9D2H5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms