Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.3■□□□□ 0.04
Trim16Q99PP9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Trim16Q99PP9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.3■□□□□ 0.04
Trim16Q99PP9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim16Q99PP9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.29■□□□□ 0.04
Trim16Q99PP9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Ank2-226ENSMUST00000189368 339 ntBASIC15.29■□□□□ 0.04
Trim16Q99PP9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim16Q99PP9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.29■□□□□ 0.04
Trim16Q99PP9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim16Q99PP9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.28■□□□□ 0.04
Trim16Q99PP9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim16Q99PP9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms