Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tlr3Q99MB1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tlr3Q99MB1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tlr3Q99MB1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tlr3Q99MB1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tlr3Q99MB1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gm18622-201ENSMUST00000219361 595 ntBASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gm8655-201ENSMUST00000221159 852 ntBASIC16.76■□□□□ 0.27
Tlr3Q99MB1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tlr3Q99MB1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Gm18206-201ENSMUST00000207027 926 ntBASIC16.75■□□□□ 0.27
Tlr3Q99MB1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Tlr3Q99MB1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Rps4l-201ENSMUST00000071745 943 ntBASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tlr3Q99MB1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms