Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Gm30025-201ENSMUST00000218555 728 ntBASIC15.79■□□□□ 0.12
Cdk9Q99J95 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.79■□□□□ 0.12
Cdk9Q99J95 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.79■□□□□ 0.12
Cdk9Q99J95 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk9Q99J95 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Cdk9Q99J95 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk9Q99J95 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.77■□□□□ 0.12
Cdk9Q99J95 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 Gm11539-201ENSMUST00000119837 557 ntBASIC15.77■□□□□ 0.12
Cdk9Q99J95 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.77■□□□□ 0.12
Cdk9Q99J95 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk9Q99J95 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk9Q99J95 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gm18421-201ENSMUST00000204122 625 ntBASIC15.76■□□□□ 0.11
Cdk9Q99J95 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms