Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Grk6-207ENSMUST00000225925 2769 ntBASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gm6443-201ENSMUST00000203599 874 ntBASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha11Q91Y19 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha11Q91Y19 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdha11Q91Y19 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdha11Q91Y19 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Gm18206-201ENSMUST00000207027 926 ntBASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha11Q91Y19 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 150.1 ms