Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Gm12644-201ENSMUST00000119935 606 ntBASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Gm19164-201ENSMUST00000210667 640 ntBASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdhb1Q91Y08 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Gm8655-201ENSMUST00000221159 852 ntBASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb1Q91Y08 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Gm8344-201ENSMUST00000119813 856 ntBASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb1Q91Y08 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Gm27741-201ENSMUST00000185060 237 ntBASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 254.2 ms