Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb6Q91XZ4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb6Q91XZ4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Gm34391-201ENSMUST00000203706 907 ntBASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb6Q91XZ4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms