Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Gm9172-201ENSMUST00000212092 954 ntBASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga4Q91XY4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Rps4l-201ENSMUST00000071745 943 ntBASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga4Q91XY4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Gm27867-201ENSMUST00000184778 125 ntBASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga4Q91XY4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Gm12497-201ENSMUST00000138778 237 ntBASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms