Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm33142-201ENSMUST00000193913 867 ntBASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Asic1-205ENSMUST00000228185 1818 ntBASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb4Q91XX6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb4Q91XX6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Sybu-209ENSMUST00000228639 4113 ntBASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb4Q91XX6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb4Q91XX6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms