Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Gm45747-201ENSMUST00000212203 999 ntBASIC15.42■□□□□ 0.06
Vsx1Q91V10 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.42■□□□□ 0.06
Vsx1Q91V10 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.42■□□□□ 0.06
Vsx1Q91V10 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vsx1Q91V10 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.42■□□□□ 0.06
Vsx1Q91V10 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vsx1Q91V10 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.41■□□□□ 0.06
Vsx1Q91V10 Gm11745-201ENSMUST00000121669 448 ntBASIC15.41■□□□□ 0.06
Vsx1Q91V10 Gm45612-201ENSMUST00000211320 160 ntBASIC15.41■□□□□ 0.06
Vsx1Q91V10 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.41■□□□□ 0.06
Vsx1Q91V10 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.41■□□□□ 0.06
Vsx1Q91V10 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vsx1Q91V10 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Gm15427-201ENSMUST00000117288 531 ntBASIC15.4■□□□□ 0.06
Vsx1Q91V10 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.4■□□□□ 0.06
Vsx1Q91V10 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vsx1Q91V10 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.4■□□□□ 0.06
Vsx1Q91V10 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.39■□□□□ 0.05
Vsx1Q91V10 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.39■□□□□ 0.05
Vsx1Q91V10 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vsx1Q91V10 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.39■□□□□ 0.05
Vsx1Q91V10 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms