Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Gm5587-201ENSMUST00000206270 674 ntBASIC16.19■□□□□ 0.18
Trim60Q8VI40 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.19■□□□□ 0.18
Trim60Q8VI40 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.19■□□□□ 0.18
Trim60Q8VI40 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.18■□□□□ 0.18
Trim60Q8VI40 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim60Q8VI40 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim60Q8VI40 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.17■□□□□ 0.18
Trim60Q8VI40 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim60Q8VI40 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm45328-201ENSMUST00000210942 917 ntBASIC16.16■□□□□ 0.18
Trim60Q8VI40 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.16■□□□□ 0.18
Trim60Q8VI40 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim60Q8VI40 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms