Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpa1Q8VEE4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Odf3b-204ENSMUST00000227834 930 ntBASIC15.77■□□□□ 0.12
Rpa1Q8VEE4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Rpa1Q8VEE4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpa1Q8VEE4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms