Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Mir5131-201ENSMUST00000175426 93 ntBASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 AW822252-206ENSMUST00000208904 237 ntBASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg1dQ8VE91 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Gm4459-201ENSMUST00000118750 468 ntBASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Gm10060-201ENSMUST00000212002 111 ntBASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg1dQ8VE91 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Gm13418-201ENSMUST00000119097 944 ntBASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg1dQ8VE91 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms