Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssx2ipQ8VC66 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Gm13312-201ENSMUST00000119631 718 ntBASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssx2ipQ8VC66 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Mir3081-201ENSMUST00000175305 84 ntBASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ssx2ipQ8VC66 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssx2ipQ8VC66 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssx2ipQ8VC66 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms