Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.71■□□□□ 0.59
Top1mtQ8R4U6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top1mtQ8R4U6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top1mtQ8R4U6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Top1mtQ8R4U6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.71■□□□□ 0.58
Top1mtQ8R4U6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Top1mtQ8R4U6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.7■□□□□ 0.58
Top1mtQ8R4U6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Gm8655-201ENSMUST00000221159 852 ntBASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top1mtQ8R4U6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm9103-201ENSMUST00000119371 405 ntBASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top1mtQ8R4U6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top1mtQ8R4U6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms